1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0027s0145.1

Vocar.0027s0145.1 (32887059)


Aliases : 32887059

Description : Glycoside hydrolase, family 77; Carbohydrate binding module family 20 [Interproscan].


Gene families : OG_01_0001906 (OrthoFinder) Phylogenetic Tree(s): OG0001906_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0027s0145.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre02.g095126 30785340, DPE2 Carbohydrate metabolism.starch... 0.03 OrthoFinder
Transcript_contig_243 243 Carbohydrate binding module family 20; Glycoside... 0.02 OrthoFinder
lcl|BLLF01002212.1_cds_GFH23191.1_17668 HaLaN_20769, GFH23191 Glycoside hydrolase, family 77 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002044 CBM_fam20 14 83
IPR002044 CBM_fam20 182 256
IPR003385 Glyco_hydro_77 286 919
No external refs found!