Vocar.0024s0212.1 (32890424)


Aliases : 32890424

Description : CTLH/CRA C-terminal to LisH motif domain; SPRY domain [Interproscan].


Gene families : OG_01_0001338 (OrthoFinder) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0024s0212.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
EOD39844 No alias F-box domain; SPRY domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_58174 58174 SPRY domain [Interproscan]. 0.01 OrthoFinder
XM_002507255.1 MICPUN_55425, 55425 SPRY domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0045116 protein neddylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 272 529
IPR003877 SPRY_dom 73 190
No external refs found!