Vocar.0022s0101.1 (32891772)

Aliases : 32891772

Description : Poly A polymerase, head domain [Interproscan].

Gene families : OG_01_0000923 (OrthoFinder) Phylogenetic Tree(s): OG0000923_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0022s0101.1
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0701s00002.1	33185975	Poly A polymerase, head domain [Interproscan].	0.02	OrthoFinder
PTI_03G06410.1	No alias	tRNA nucleotidyltransferase/poly(A) polymerase, RNA and...	0.01	OrthoFinder
lcl\|BLLF01002267.1_cds_GFH23416.1_17893	HaLaN_21025, GFH23416	PolyA_pol domain-containing protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
CC	GO:0016459	myosin complex	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002646	PolA_pol_head_dom	346	406

External Links

No external refs found!