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  5. Vocar.0019s0207.1

Vocar.0019s0207.1 (32892639)


Aliases : 32892639

Description : DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like, AAA domain [Interproscan].


Gene families : OG_01_0000282 (OrthoFinder) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0207.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre03.g150350 30786728 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder
Cre09.g396139 30780743 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder
EOD13441 No alias DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.02 OrthoFinder
EOD22247 No alias DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.02 OrthoFinder
EOD32017 No alias Domain of unknown function DUF5599; RNA helicase UPF1,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1045 1308
IPR041677 DNA2/NAM7_AAA_11 773 1037
No external refs found!