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  5. Vocar.0018s0208.1

Vocar.0018s0208.1 (32898512)


Aliases : 32898512

Description : K Homology domain, type 1 [Interproscan].


Gene families : OG_01_0000189 (OrthoFinder) Phylogenetic Tree(s): OG0000189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0018s0208.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Dusal.1007s00003.1 33187007 K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_61218 61218 K Homology domain, type 1 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001440.1_cds_GFH19306.1_13783 HaLaN_16234, GFH19306 K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 253 316
IPR004088 KH_dom_type_1 143 205
IPR004088 KH_dom_type_1 45 110
No external refs found!