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  5. Vocar.0016s0298.1

Vocar.0016s0298.1 (32897913)


Aliases : 32897913

Description : Hypothetical protein


Gene families : OG_01_0007042 (OrthoFinder) Phylogenetic Tree(s): OG0007042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0298.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre12.g505300 30792219 No description available 0.09 OrthoFinder
Cz05g11100.t1 No alias Spc7 kinetochore protein domain [Interproscan]. 0.07 OrthoFinder
Dusal.0201s00009.1 33186091 Spc7 kinetochore protein domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55289 55289 Spc7 kinetochore protein domain [Interproscan]. 0.04 OrthoFinder
Transcript_contig_55908 55908 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58112.1_7877 PRW58112 Spc7 kinetochore protein domain [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!