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  5. Vocar.0016s0237.1

Vocar.0016s0237.1 (32898119)


Aliases : 32898119

Description : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain [Interproscan].


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0237.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.7 tig00000402_g182.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000551.19 tig00000551_g2040.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000802.31 tig00000802_g4280.t2 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000984.21 tig00000984_g5996.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001187.22 tig00001187_g7471.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020904.36 tig00020904_g15169.t1 No description available 0.03 OrthoFinder
Cre02.g143400 30785899 No description available 0.02 OrthoFinder
Cre03.g204689 30787023, PDE21 No description available 0.02 OrthoFinder
Cre06.g289400 30779271, PDE11 No description available 0.02 OrthoFinder
Cre07.g342350 30774937, PDE14 No description available 0.04 OrthoFinder
Cre11.g467673 30775846, PDE24 No description available 0.04 OrthoFinder
Cre12.g509550 30792951, PDE5 No description available 0.03 OrthoFinder
Cre13.g590600 30784358 No description available 0.03 OrthoFinder
Cre14.g617750 30776335, PDE3 No description available 0.02 OrthoFinder
Cre16.g664150 30777464, PDE18 No description available 0.02 OrthoFinder
Cre16.g664200 30778171 No description available 0.02 OrthoFinder
Cz03g19140.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.03 OrthoFinder
Cz08g02130.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Cz08g02140.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
Dusal.0096s00006.1 33195833 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Dusal.0118s00018.1 33199930 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
Dusal.0272s00021.1 33196423 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Dusal.0272s00022.1 33196432 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Dusal.0362s00009.1 33189258 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.03 OrthoFinder
Dusal.1147s00002.1 33198953 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
SymbC1.scaffold1756.5 1756.5 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
SymbC1.scaffold3471.4 3471.4 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
SymbC1.scaffold614.6 614.6 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
SymbC1.scaffold616.7 616.7 Glycosyl transferase, family 15 [Interproscan]. 0.01 OrthoFinder
Vocar.0067s0032.1 32884135 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.03 OrthoFinder
XM_003059257.1 MicpuC2_4565, 4565 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
lcl|BLLF01000251.1_cds_GFH09652.1_4129 HaLaN_04833, GFH09652 Phosphodiesterase 0.02 OrthoFinder
lcl|BLLF01000539.1_cds_GFH12783.1_7260 HaLaN_08533, GFH12783 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001132.1_cds_GFH17336.1_11813 HaLaN_13949, GFH17336 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001132.1_cds_GFH17337.1_11814 HaLaN_13950, GFH17337 Phosphodiesterase 0.02 OrthoFinder
lcl|BLLF01001596.1_cds_GFH20210.1_14687 HaLaN_17293, GFH20210 3',5'-cyclic-nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01002475.1_cds_GFH24218.1_18695 HaLaN_21966, GFH24218 Phosphodiesterase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 371 627
No external refs found!