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  5. Vocar.0016s0100.1

Vocar.0016s0100.1 (32898108)


Aliases : 32898108

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001969 (OrthoFinder) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0100.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre12.g489750 30791845, FAP52 Cilia- and flagella-associated protein 52... 0.09 OrthoFinder
Cz10g27060.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0420s00008.1 33194860 WD40 repeat [Interproscan]. 0.04 OrthoFinder
EOD09656 No alias WD40 repeat-containing protein [Ensembl]. 0.03 OrthoFinder
EOD22832 No alias WD40 repeat-containing protein [Ensembl]. 0.02 OrthoFinder
EOD25992 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002500050.1 MICPUN_104754, 104754 Partial 0.03 OrthoFinder
lcl|BLLF01000676.1_cds_GFH14005.1_8482 HaLaN_09977, GFH14005 WD40 repeat [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001236.1_cds_GFH18011.1_12488 HaLaN_14744, GFH18011 Cilia- and flagella-associated protein 52 0.02 OrthoFinder
lcl|BLLF01002628.1_cds_GFH24774.1_19251 HaLaN_22628, GFH24774 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP Enrichment
BP GO:0003341 cilium movement IEP Enrichment
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0060294 cilium movement involved in cell motility IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 464 497
IPR001680 WD40_repeat 543 580
IPR001680 WD40_repeat 422 452
IPR001680 WD40_repeat 52 74
No external refs found!