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  5. Vocar.0016s0001.1

Vocar.0016s0001.1 (32898033)


Aliases : 32898033

Description : Proteasome alpha-subunit, N-terminal domain; Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0003437 (OrthoFinder) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0016s0001.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 tig00020965_g16836.t1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder
Cre10.g418100 30789792, POA3 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder
Cz12g21180.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
OT_02G00120.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
PTI_01G02920.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
Sro495_g154380.1 Contig3243.g25618 Proteasome subunit alpha type 0.08 OrthoFinder
TP04G07880.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
XM_002507041.1 MICPUN_113362, 113362 Proteasome_alpha-4 subunit (PAC1) 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45558.1_1248 PRW45558 Proteasome subunit alpha type-4 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 29 217
No external refs found!