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  5. Vocar.0015s0390.1

Vocar.0015s0390.1 (32899137)


Aliases : 32899137

Description : PRMT5, TIM barrel domain; PRMT5 arginine-N-methyltransferase; PRMT5, oligomerisation domain [Interproscan].


Gene families : OG_01_0003317 (OrthoFinder) Phylogenetic Tree(s): OG0003317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0390.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000008.1_cds_PRW56786.1_9777 PRW56786 Arginine N-methyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR035248 PRMT5_C 511 676
IPR035247 PRMT5_TIM 36 329
IPR035075 PRMT5 308 508
No external refs found!