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  5. Vocar.0015s0287.1

Vocar.0015s0287.1 (32899068)


Aliases : 32899068

Description : AMP-binding enzyme, C-terminal domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000298 (OrthoFinder) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0287.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
EOD21444 No alias Long chain acyl-CoA synthetase [Ensembl]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 544 601
IPR000873 AMP-dep_Synth/Lig 78 535
No external refs found!