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  5. Vocar.0015s0099.1

Vocar.0015s0099.1 (32898971)


Aliases : 32898971

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0099.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001269.7 tig00001269_g7978.t1 External stimuli response.temperature.Hsp... 0.01 OrthoFinder
Cz03g15060.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Cz09g09030.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
EOD10125 No alias Heat shock protein 60 [Ensembl]. 0.01 OrthoFinder
EOD15264 No alias Heat shock protein 60 [Ensembl]. 0.02 OrthoFinder
EOD29151 No alias Heat shock protein 60 [Ensembl]. 0.01 OrthoFinder
OT_07G02370.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
OT_12G03000.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold87.58 87.58 Chaperonin Cpn60/TCP-1 family; GroES chaperonin family... 0.01 OrthoFinder
TP06G07750.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_003055738.1 MicpuC2_45207, 45207 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61354.1_599 PRW61354 Ru large subunit-binding subunit chloroplastic isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006808 regulation of nitrogen utilization IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 50 553
No external refs found!