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  5. Vocar.0015s0087.1

Vocar.0015s0087.1 (32898976)


Aliases : 32898976

Description : Coatomer subunit gamma, C-terminal; Coatomer, gamma subunit, appendage, Ig-like subdomain; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].


Gene families : OG_01_0003039 (OrthoFinder) Phylogenetic Tree(s): OG0003039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0087.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.20 tig00020629_g12339.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Cre06.g310750 30779296, COPG1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder
Cz03g11160.t1 No alias Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.02 OrthoFinder
Dusal.0055s00019.1 33187651 Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.05 OrthoFinder
Sro26_g017600.1 Contig2432.g19931 Coatomer subunit gamma 0.05 OrthoFinder
Transcript_contig_54351 54351 Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497194.1_923 KAA8497194 Coatomer subunit gamma-2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009264 deoxyribonucleotide catabolic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013040 Coatomer_gsu_app_Ig-like_dom 635 781
IPR002553 Clathrin/coatomer_adapt-like_N 39 547
IPR032154 Coatomer_g_Cpla 783 897
No external refs found!