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  5. Cpa|evm.model.tig00000025.22

Cpa|evm.model.tig00000025.22 (tig00000025_g7932.t1)


Aliases : tig00000025_g7932.t1

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL28 component


Gene families : OG_01_0003844 (OrthoFinder) Phylogenetic Tree(s): OG0003844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000025.22
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cre13.g579150 30784341 No description available 0.04 OrthoFinder
Cz08g19130.t1 No alias Hypothetical protein 0.04 OrthoFinder
OT_04G04280.1 No alias Ribosomal protein L28/L24 [Interproscan]. 0.02 OrthoFinder
PTI_07G03020.1 No alias Ribosomal protein L28/L24 [Interproscan]. 0.02 OrthoFinder
Sro1124_g243770.1 Contig4358.g32835 Protein L28 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005869 dynactin complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 10 63
No external refs found!