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  5. Vocar.0015s0033.1

Vocar.0015s0033.1 (32898815)


Aliases : 32898815

Description : Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan].


Gene families : OG_01_0000842 (OrthoFinder) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0033.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre06.g309300 30779686 Ribosomal RNA small subunit methyltransferase,... 0.04 OrthoFinder
TP05G03850.1 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44303.1_2409 PRW44303 Dimethyladenosine transferase 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494275.1_4139 KAA8494275 Ribosomal RNA small subunit methyltransferase A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 139 441
No external refs found!