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  5. Vocar.0014s0275.1

Vocar.0014s0275.1 (32888536)


Aliases : 32888536

Description : PUA domain; SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].


Gene families : OG_01_0004153 (OrthoFinder) Phylogenetic Tree(s): OG0004153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0014s0275.1
Cluster HCCA: Cluster_124


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002478 PUA 243 290
IPR001678 MeTrfase_RsmB/NOP2 682 756
IPR001678 MeTrfase_RsmB/NOP2 528 599
No external refs found!