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Aliases : 32896484
Description : Calcium-dependent channel, 7TM region, putative phosphate [Interproscan].
Gene families : OG_01_0000148 (OrthoFinder) Phylogenetic Tree(s): OG0000148_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0013s0157.1 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g360500 | 30773726, ERM2 | CSC1-like protein At1g62320 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre09.g399912 | 30780190 | CSC1-like protein At3g21620 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cz09g17130.t1 | No alias | Calcium-dependent channel, 7TM region, putative... | 0.02 | OrthoFinder | |
| Transcript_contig_1168 | 1168 | Calcium-dependent channel, 7TM region, putative... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005685 | U1 snRNP | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006376 | mRNA splice site selection | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Enrichment |
| BP | GO:0009314 | response to radiation | IEP | Enrichment |
| BP | GO:0009411 | response to UV | IEP | Enrichment |
| BP | GO:0009416 | response to light stimulus | IEP | Enrichment |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Enrichment |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003864 | RSN1_7TM | 748 | 1015 |
| No external refs found! |