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Aliases : 32895454
Description : Brix domain [Interproscan].
Gene families : OG_01_0002998 (OrthoFinder) Phylogenetic Tree(s): OG0002998_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0011s0309.1 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001003.36 | tig00001003_g6291.t1 | Ribosome production factor 2 homolog OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
| Cre03.g197000 | 30787867 | Ribosome production factor 2 homolog OS=Arabidopsis thaliana | 0.06 | OrthoFinder | |
| Cz01g37260.t1 | No alias | Brix domain [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.0095s00009.1 | 33190289 | Brix domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD30893 | No alias | Brix domain [Interproscan]. | 0.03 | OrthoFinder | |
| OT_17G01690.1 | No alias | Brix domain [Interproscan]. | 0.07 | OrthoFinder | |
| PTI_06G01690.1 | No alias | Brix domain [Interproscan]. | 0.04 | OrthoFinder | |
| Sro545_g163870.1 | Contig1180.g11230 | Production factor 2 homolog | 0.03 | OrthoFinder | |
| TP03G03260.1 | No alias | Brix domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_82014 | 82014 | Brix domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002506064.1 | MICPUN_70830, 70830 | Brix domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003056730.1 | MicpuC2_5469, 5469 | Brix domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01001273.1_cds_GFH18265.1_12742 | HaLaN_15038, GFH18265 | Brix domain-containing protein | 0.05 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8497175.1_904 | KAA8497175 | Ribosome production factor 2-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0015858 | nucleoside transport | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007109 | Brix | 47 | 242 |
| No external refs found! |