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Aliases : 32895253
Description : GIY-YIG endonuclease [Interproscan].
Gene families : OG_01_0001946 (OrthoFinder) Phylogenetic Tree(s): OG0001946_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0011s0042.1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro227_g092410.1 | Contig327.g4353 | Endonuclease subunit SLX1 | 0.02 | OrthoFinder | |
| SymbC1.scaffold879.7 | 879.7 | GIY-YIG endonuclease [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003060808.1 | MicpuC2_7646, 7646 | GIY-YIG endonuclease [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45693.1_1464 | PRW45693 | Structure-specific endonuclease subunit SLX1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000305 | GIY-YIG_endonuc | 5 | 81 |
| No external refs found! |