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  5. Vocar.0009s0212.1

Vocar.0009s0212.1 (32893551)


Aliases : 32893551

Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0009s0212.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021073.18 tig00021073_g18021.t1 Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder
Cre09.g398252 30780830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.07 OrthoFinder
Dusal.0165s00018.1 33193372 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
EOD37749 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
Sro1390_g268680.1 Contig2158.g18124 Daunorubicin C-13 ketoreductase DnrU 0.03 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.04 OrthoFinder
Sro3965_g352250.1 Contig1669.g15029 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.03 OrthoFinder
SymbC1.scaffold343.5 343.5 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
XM_003059227.1 MicpuC2_17965, 17965 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003807.1_cds_GFH28260.1_22737 HaLaN_26728, GFH28260 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 39 238
No external refs found!