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  5. Vocar.0008s0406.1

Vocar.0008s0406.1 (32897430)


Aliases : 32897430

Description : YrdC-like domain; Putative GTP-binding controlling metal-binding domain [Interproscan].


Gene families : OG_01_0001926 (OrthoFinder) Phylogenetic Tree(s): OG0001926_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0008s0406.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
TP04G06680.1 No alias YrdC-like domain; Putative GTP-binding controlling... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
CC GO:0005813 centrosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007098 centrosome cycle IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008430 selenium binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
BP GO:0031023 microtubule organizing center organization IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006070 YrdC-like_dom 113 292
IPR005145 Sua5_C 295 560
No external refs found!