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  5. Vocar.0007s0424.1

Vocar.0007s0424.1 (32888285)


Aliases : 32888285

Description : SET domain [Interproscan].


Gene families : OG_01_0004340 (OrthoFinder) Phylogenetic Tree(s): OG0004340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0007s0424.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Dusal.0331s00004.1 33192988 Hypothetical protein 0.02 OrthoFinder
Dusal.0331s00005.1 33192980 SET domain; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
EOD12047 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 30 323
No external refs found!