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  5. Vocar.0007s0092.1

Vocar.0007s0092.1 (32888131)


Aliases : 32888131

Description : Nucleoporin Nup54, alpha-helical domain [Interproscan].


Gene families : OG_01_0005893 (OrthoFinder) Phylogenetic Tree(s): OG0005893_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0007s0092.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre12.g542950 30791957 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Transcript_contig_70172 70172 Nucleoporin Nup54, alpha-helical domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR025712 Nup54_alpha-helical_dom 257 408
No external refs found!