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  5. Vocar.0007s0025.1

Vocar.0007s0025.1 (32887870)


Aliases : 32887870

Description : Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain [Interproscan].


Gene families : OG_01_0007761 (OrthoFinder) Phylogenetic Tree(s): OG0007761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0007s0025.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cre10.g433950 30790936 No description available 0.02 OrthoFinder
Dusal.1003s00001.1 33193867 Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR025564 CAAD_dom 66 150
No external refs found!