1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0006s0029.1

Vocar.0006s0029.1 (32894231)


Aliases : 32894231

Description : Uncharacterised domain NUC173 [Interproscan].


Gene families : OG_01_0002874 (OrthoFinder) Phylogenetic Tree(s): OG0002874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0029.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.42 tig00020554_g10824.t1 No description available 0.04 OrthoFinder
Cre19.g751197 30778316 No description available 0.06 OrthoFinder
Cz04g06250.t1 No alias Uncharacterised domain NUC173 [Interproscan]. 0.04 OrthoFinder
Dusal.0675s00008.1 33202440 Uncharacterised domain NUC173 [Interproscan]. 0.02 OrthoFinder
EOD33147 No alias Uncharacterised domain NUC173 [Interproscan]. 0.02 OrthoFinder
PTI_01G02060.1 No alias Uncharacterised domain NUC173 [Interproscan]. 0.05 OrthoFinder
Sro536_g162240.1 Contig299.g3954 RRP12-like protein 0.04 OrthoFinder
TP03G00440.1 No alias Uncharacterised domain NUC173 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55853 55853 Uncharacterised domain NUC173 [Interproscan]. 0.01 OrthoFinder
XM_002504930.1 MICPUN_62622, 62622 Uncharacterised domain NUC173 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60392.1_4606 PRW60392 ARM repeat superfamily 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497894.1_6847 KAA8497894 Putative ribosomal RNA-processing protein 12 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 409 636
No external refs found!