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  5. Vocar.0005s0255.1

Vocar.0005s0255.1 (32883849)


Aliases : 32883849

Description : PAS domain [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0005s0255.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.36 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000025.37 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000025.38 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021522.9 tig00021522_g22101.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.33 tig00021537_g22286.t1 No description available 0.04 OrthoFinder
Cre02.g142166 30786493 No description available 0.09 OrthoFinder
Cre05.g233650 30783131, FXL9 No description available 0.05 OrthoFinder
Cre09.g397000 30780571 No description available 0.04 OrthoFinder
Cre10.g457400 30790407 No description available 0.03 OrthoFinder
Cre13.g587550 30783866 No description available 0.03 OrthoFinder
Cre17.g698903 30781618 No description available 0.02 OrthoFinder
Cz03g08250.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz03g29010.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz04g22190.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz06g35270.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz06g35280.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz06g35290.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz15g11180.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz17g00100.t1 No alias Hypothetical protein 0.03 OrthoFinder
Dusal.0051s00004.1 33199001 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0564s00003.1 33195688 Hypothetical protein 0.02 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.03 OrthoFinder
EOD05797 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
UNPLg00190.t1 No alias Hypothetical protein 0.02 OrthoFinder
Vocar.0001s0015.1 32886137 PAS fold [Interproscan]. 0.04 OrthoFinder
Vocar.0003s0436.1 32889288 PAS domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000429.1_cds_GFH11722.1_6199 HaLaN_07268, GFH11722 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000513.1_cds_GFH12539.1_7016 HaLaN_08248, GFH12539 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000993.1_cds_GFH16401.1_10878 HaLaN_12813, GFH16401 Tiny macrocysts protein B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 632 729
No external refs found!