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  5. Vocar.0005s0235.1

Vocar.0005s0235.1 (32883873)


Aliases : 32883873

Description : Ribosomal RNA methyltransferase FtsJ domain; RNA-binding S4 domain [Interproscan].


Gene families : OG_01_0003789 (OrthoFinder) Phylogenetic Tree(s): OG0003789_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0005s0235.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cre10.g428900 30790278 No description available 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0030677 ribonuclease P complex IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 147 189
IPR002877 rRNA_MeTrfase_FtsJ_dom 205 381
No external refs found!