Vocar.0005s0095.1 (32884072)

Aliases : 32884072

Description : Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].

Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0005s0095.1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Cre07.g352350	30774541	ATP-dependent zinc metalloprotease FTSH, chloroplastic...	0.11	OrthoFinder
Cre17.g739752	30782539	Probable inactive ATP-dependent zinc metalloprotease...	0.06	OrthoFinder
Cz02g01040.t1	No alias	Peptidase M41, FtsH extracellular; AAA ATPase, AAA+ lid...	0.03	OrthoFinder
Cz05g27050.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.03	OrthoFinder
Cz13g18040.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.06	OrthoFinder
OT_08G02770.1	No alias	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.04	OrthoFinder
OT_10G01100.1	No alias	Peptidase M41; AAA ATPase, AAA+ lid domain; ATPase,...	0.04	OrthoFinder
OT_11G02060.1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.07	OrthoFinder
OT_16G00870.1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.04	OrthoFinder
XM_002503449.1	MICPUN_59866, 59866	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.04	OrthoFinder
XM_002503935.1	MICPUN_83563, 83563	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core...	0.06	OrthoFinder
XM_002508974.1	MICPUN_87320, 87320	Peptidase M41; AAA ATPase, AAA+ lid domain; ATPase,...	0.02	OrthoFinder
XM_003054912.1	MicpuC2_61359, 61359	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.03	OrthoFinder
XM_003055594.1	MicpuC2_1627, 1627	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
XM_003061697.1	MicpuC2_28671, 28671	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.03	OrthoFinder
lcl\|BLLF01003257.1_cds_GFH26835.1_21312	HaLaN_25053, GFH26835	AAA domain-containing protein	0.02	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW60934.1_745	PRW60934	ATP-dependent zinc metalloprotease chloroplastic isoform C	0.03	OrthoFinder
lcl\|LHPG02000010.1_cds_PRW51102.1_1065	PRW51102	ATP-dependent zinc metalloprotease FTSH chloroplastic isoform B	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Enrichment
BP	GO:0000105	histidine biosynthetic process	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Enrichment
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Enrichment
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005048	signal sequence binding	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0006534	cysteine metabolic process	IEP	Enrichment
BP	GO:0006547	histidine metabolic process	IEP	Enrichment
BP	GO:0006621	protein retention in ER lumen	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0008987	quinolinate synthetase A activity	IEP	Enrichment
BP	GO:0009069	serine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009092	homoserine metabolic process	IEP	Enrichment
BP	GO:0009435	NAD biosynthetic process	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Enrichment
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
MF	GO:0019238	cyclohydrolase activity	IEP	Enrichment
BP	GO:0019346	transsulfuration	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
BP	GO:0032507	maintenance of protein location in cell	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Enrichment
MF	GO:0042277	peptide binding	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0045185	maintenance of protein location	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
MF	GO:0046923	ER retention sequence binding	IEP	Enrichment
BP	GO:0050667	homocysteine metabolic process	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051235	maintenance of location	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
BP	GO:0051651	maintenance of location in cell	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	789	992
IPR003959	ATPase_AAA_core	552	682
IPR041569	AAA_lid_3	706	747

External Links

No external refs found!

Vocar.0005s0095.1 (32884072)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation