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  5. Vocar.0004s0450.1

Vocar.0004s0450.1 (32889785)


Aliases : 32889785

Description : DNA photolyase, N-terminal; Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan].


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0450.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000391.2 tig00000391_g24833.t1 DNA damage response.DNA repair... 0.02 OrthoFinder
Cpa|evm.model.tig00020965.69 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder
Cpa|evm.model.tig00020965.70 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cpa|evm.model.tig00021012.26 tig00021012_g17007.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cpa|evm.model.tig00021579.19 tig00021579_g22443.t1 Cryptochrome-1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.04 OrthoFinder
lcl|BLLF01000049.1_cds_GFH06657.1_1134 HaLaN_01325, GFH06657 Photolyase/cryptochrome alpha/beta domain-containing protein 0.03 OrthoFinder
lcl|BLLF01001067.1_cds_GFH16890.1_11367 HaLaN_13407, GFH16890 Deoxyribodipyrimidine photo-lyase 0.01 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19868.1_14345 HaLaN_16893, GFH19868 Photolyase/cryptochrome alpha/beta domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 341 520
IPR006050 DNA_photolyase_N 10 213
No external refs found!