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  5. Vocar.0004s0312.1

Vocar.0004s0312.1 (32889633)


Aliases : 32889633

Description : PAS fold [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0312.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000317.32 tig00000317_g24044.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000317.33 tig00000317_g24044.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021522.9 tig00021522_g22101.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.33 tig00021537_g22286.t1 No description available 0.03 OrthoFinder
Cre02.g142166 30786493 No description available 0.08 OrthoFinder
Cre05.g233650 30783131, FXL9 No description available 0.05 OrthoFinder
Cre13.g586700 30784046 No description available 0.02 OrthoFinder
Cre13.g587550 30783866 No description available 0.02 OrthoFinder
Cre17.g698903 30781618 No description available 0.02 OrthoFinder
Cre17.g708000 30782648, FAP260 No description available 0.02 OrthoFinder
Cz03g02250.t1 No alias PAS domain [Interproscan]. 0.05 OrthoFinder
Cz03g29010.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz04g22190.t1 No alias Hypothetical protein 0.01 OrthoFinder
Cz12g28200.t1 No alias PAS domain [Interproscan]. 0.04 OrthoFinder
Cz15g11180.t1 No alias Hypothetical protein 0.01 OrthoFinder
Cz15g19100.t1 No alias PAS domain [Interproscan]. 0.03 OrthoFinder
Cz18g03020.t1 No alias PAS domain [Interproscan]. 0.05 OrthoFinder
Dusal.0012s00037.1 33201991 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0729s00003.1 33203053 PAS domain [Interproscan]. 0.03 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.02 OrthoFinder
UNPLg00188.t1 No alias Hypothetical protein 0.03 OrthoFinder
UNPLg00189.t1 No alias PAS domain [Interproscan]. 0.03 OrthoFinder
UNPLg00190.t1 No alias Hypothetical protein 0.01 OrthoFinder
Vocar.0002s0204.1 32891156 PAS domain; PAS fold [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000096.1_cds_GFH07471.1_1948 HaLaN_02275, GFH07471 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000513.1_cds_GFH12539.1_7016 HaLaN_08248, GFH12539 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001584.1_cds_GFH20156.1_14633 HaLaN_17235, GFH20156 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005874 microtubule IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019799 tubulin N-acetyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071929 alpha-tubulin acetylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0099081 supramolecular polymer IEP Enrichment
CC GO:0099512 supramolecular fiber IEP Enrichment
CC GO:0099513 polymeric cytoskeletal fiber IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR013767 PAS_fold 637 739
No external refs found!