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  5. Vocar.0003s0516.1

Vocar.0003s0516.1 (32889124)


Aliases : 32889124

Description : GTP cyclohydrolase I domain [Interproscan].


Gene families : OG_01_0001145 (OrthoFinder) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0516.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000147.14 tig00000147_g9451.t1 Coenzyme metabolism.tetrahydrofolate synthesis.pterin... 0.01 OrthoFinder
Cpa|evm.model.tig00000147.15 tig00000147_g9451.t1 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase... 0.01 OrthoFinder
Cre09.g393913 30780379 Coenzyme metabolism.tetrahydrofolate synthesis.pterin... 0.02 OrthoFinder
lcl|BLLF01000455.1_cds_GFH11980.1_6457 HaLaN_07587, GFH11980 GTP_cyclohydroI domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020602 GTP_CycHdrlase_I_dom 594 625
IPR020602 GTP_CycHdrlase_I_dom 539 566
IPR020602 GTP_CycHdrlase_I_dom 14 164
IPR020602 GTP_CycHdrlase_I_dom 685 733
No external refs found!