Vocar.0003s0445.1 (32888873)

Aliases : 32888873

Description : PAS domain; PAS fold [Interproscan].

Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0003s0445.1
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021522.9	tig00021522_g22101.t1	No description available	0.03	OrthoFinder
Cre02.g142166	30786493	No description available	0.04	OrthoFinder
Cre05.g233650	30783131, FXL9	No description available	0.05	OrthoFinder
Cre09.g397000	30780571	No description available	0.02	OrthoFinder
Cre10.g427850	30790464	No description available	0.02	OrthoFinder
Cre11.g469500	30776071	No description available	0.02	OrthoFinder
Cre13.g586700	30784046	No description available	0.03	OrthoFinder
Cre13.g587550	30783866	No description available	0.02	OrthoFinder
Cre17.g698903	30781618	No description available	0.02	OrthoFinder
Cre17.g708000	30782648, FAP260	No description available	0.04	OrthoFinder
Cz04g22210.t1	No alias	PAS fold [Interproscan].	0.02	OrthoFinder
Cz18g03020.t1	No alias	PAS domain [Interproscan].	0.02	OrthoFinder
Dusal.0012s00037.1	33201991	PAS domain [Interproscan].	0.02	OrthoFinder
Dusal.0051s00005.1	33198985	PAS fold [Interproscan].	0.02	OrthoFinder
Dusal.0065s00022.1	33185844	PAS domain [Interproscan].	0.02	OrthoFinder
Dusal.1094s00001.1	33191764	Hypothetical protein	0.02	OrthoFinder
Sro28_g018720.1	Contig404.g5481	Sensor protein FixL	0.01	OrthoFinder
Vocar.0003s0459.1	32888951	Hypothetical protein	0.02	OrthoFinder
lcl\|BLLF01000217.1_cds_GFH09211.1_3688	HaLaN_04313, GFH09211	PAS domain [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01000429.1_cds_GFH11722.1_6199	HaLaN_07268, GFH11722	Hypothetical protein	0.02	OrthoFinder
lcl\|BLLF01000513.1_cds_GFH12539.1_7016	HaLaN_08248, GFH12539	PAS domain-containing protein	0.02	OrthoFinder
lcl\|BLLF01000958.1_cds_GFH16182.1_10659	HaLaN_12556, GFH16182	PAS domain-containing protein	0.02	OrthoFinder
lcl\|BLLF01001584.1_cds_GFH20156.1_14633	HaLaN_17235, GFH20156	PAS domain-containing protein	0.02	OrthoFinder
lcl\|BLLF01006378.1_cds_GFH32196.1_26673	HaLaN_31377, GFH32196	PAS domain-containing protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0008716	D-alanine-D-alanine ligase activity	IEP	Enrichment
BP	GO:0009117	nucleotide metabolic process	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016881	acid-amino acid ligase activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Enrichment
CC	GO:0030312	external encapsulating structure	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
CC	GO:0031012	extracellular matrix	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0045765	regulation of angiogenesis	IEP	Enrichment
BP	GO:0050793	regulation of developmental process	IEP	Enrichment
BP	GO:0051239	regulation of multicellular organismal process	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment
BP	GO:1901342	regulation of vasculature development	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment
BP	GO:2000026	regulation of multicellular organismal development	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013767	PAS_fold	275	369
IPR000014	PAS	392	472
IPR000014	PAS	519	613

External Links

No external refs found!

Vocar.0003s0445.1 (32888873)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation