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  5. Vocar.0003s0434.1

Vocar.0003s0434.1 (32889060)


Aliases : 32889060

Description : WHEP-TRS domain; Aminoacyl-tRNA synthetase, class II (G/ P/ S/T); Anticodon-binding [Interproscan].


Gene families : OG_01_0002441 (OrthoFinder) Phylogenetic Tree(s): OG0002441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0434.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cre05.g233800 30783061 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
EOD37663 No alias Glycyl-tRNA synthetase [Ensembl]. 0.03 OrthoFinder
OT_07G02860.1 No alias Anticodon-binding; Aminoacyl-tRNA synthetase, class II... 0.05 OrthoFinder
Sro756_g197850.1 Contig3619.g28001 Glycine--tRNA ligase (Fragment) 0.02 OrthoFinder
Transcript_contig_54589 54589 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499972.1_8925 KAA8499972 Glycine--tRNA ligase, mitochondrial 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000738 WHEP-TRS_dom 14 63
IPR002314 aa-tRNA-synt_IIb 253 336
IPR004154 Anticodon-bd 575 667
No external refs found!