Vocar.0003s0413.1 (32889035)

Aliases : 32889035

Description : FY-rich, N-terminal; FY-rich, C-terminal; U box domain [Interproscan].

Gene families : OG_01_0009503 (OrthoFinder) Phylogenetic Tree(s): OG0009503_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0003s0413.1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre05.g239250	30783292	Putative lysine-specific demethylase JMJ16...	0.03	OrthoFinder
Cz09g08080.t1	No alias	Hypothetical protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Enrichment
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Enrichment
CC	GO:0005730	nucleolus	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0015276	ligand-gated ion channel activity	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0022834	ligand-gated channel activity	IEP	Enrichment
MF	GO:0022836	gated channel activity	IEP	Enrichment
MF	GO:0043015	gamma-tubulin binding	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003888	FYrich_N	793	838
IPR003889	FYrich_C	849	934
IPR003613	Ubox_domain	1083	1142

External Links

No external refs found!

Vocar.0003s0413.1 (32889035)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation