Vocar.0003s0248.1 (32888910)


Aliases : 32888910

Description : Bromo adjacent homology (BAH) domain; Zinc finger, GATA-type [Interproscan].


Gene families : OG_01_0000310 (OrthoFinder) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0248.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001094.21 tig00001094_g6992.t1 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder
Cre08.g358534 30773375 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder
Dusal.0320s00013.1 33189569 Zinc finger, GATA-type; Bromo adjacent homology (BAH)... 0.01 OrthoFinder
XM_002499625.1 MICPUN_107704, 107704 Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
XM_003057111.1 MicpuC2_56004, 56004 Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001536.1_cds_GFH19890.1_14367 HaLaN_16919, GFH19890 GATA transcription factor 9 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58971.1_7208 PRW58971 GATA transcription factor 16 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57413.1_8816 PRW57413 GATA transcription factor 27-like isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001025 BAH_dom 35 156
IPR000679 Znf_GATA 220 249
No external refs found!