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  5. Vocar.0002s0433.1

Vocar.0002s0433.1 (32890549)


Aliases : 32890549

Description : Histone deacetylase domain [Interproscan].


Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0433.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Sro1154_g247170.1 Contig2345.g19273 Probable histone deacetylase 1-B 0.01 OrthoFinder
Sro127_g060730.1 Contig98.g1160 Probable histone deacetylase 1-B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 100 302
No external refs found!