Vocar.0002s0204.1 (32891156)


Aliases : 32891156

Description : PAS domain; PAS fold [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0002s0204.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000441.3 tig00000441_g697.t1 No description available 0.02 OrthoFinder
Cz12g28200.t1 No alias PAS domain [Interproscan]. 0.03 OrthoFinder
Dusal.0012s00037.1 33201991 PAS domain [Interproscan]. 0.03 OrthoFinder
Sro448_g145160.1 Contig3664.g28291 Sensor protein FixL 0.03 OrthoFinder
UNPLg00188.t1 No alias Hypothetical protein 0.03 OrthoFinder
UNPLg00189.t1 No alias PAS domain [Interproscan]. 0.04 OrthoFinder
Vocar.0004s0312.1 32889633 PAS fold [Interproscan]. 0.03 OrthoFinder
Vocar.0012s0063.1 32895032 PAS domain [Interproscan]. 0.03 OrthoFinder
Vocar.0021s0101.1 32895906 PAS domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000086.1_cds_GFH07292.1_1769 HaLaN_02074, GFH07292 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000086.1_cds_GFH07293.1_1770 HaLaN_02075, GFH07293 PAS domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000092.1_cds_GFH07404.1_1881 HaLaN_02198, GFH07404 PAS fold [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000429.1_cds_GFH11722.1_6199 HaLaN_07268, GFH11722 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001945.1_cds_GFH21989.1_16466 HaLaN_19386, GFH21989 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002366.1_cds_GFH23804.1_18281 HaLaN_21483, GFH23804 Tiny macrocysts protein B 0.03 OrthoFinder
lcl|BLLF01006378.1_cds_GFH32196.1_26673 HaLaN_31377, GFH32196 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013767 PAS_fold 175 278
IPR000014 PAS 303 380
No external refs found!