Vocar.0002s0204.1 (32891156)

Aliases : 32891156

Description : PAS domain; PAS fold [Interproscan].

Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0002s0204.1
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000441.3	tig00000441_g697.t1	No description available	0.02	OrthoFinder
Cz12g28200.t1	No alias	PAS domain [Interproscan].	0.03	OrthoFinder
Dusal.0012s00037.1	33201991	PAS domain [Interproscan].	0.03	OrthoFinder
Sro448_g145160.1	Contig3664.g28291	Sensor protein FixL	0.03	OrthoFinder
UNPLg00188.t1	No alias	Hypothetical protein	0.03	OrthoFinder
UNPLg00189.t1	No alias	PAS domain [Interproscan].	0.04	OrthoFinder
Vocar.0004s0312.1	32889633	PAS fold [Interproscan].	0.03	OrthoFinder
Vocar.0012s0063.1	32895032	PAS domain [Interproscan].	0.03	OrthoFinder
Vocar.0021s0101.1	32895906	PAS domain [Interproscan].	0.03	OrthoFinder
lcl\|BLLF01000086.1_cds_GFH07292.1_1769	HaLaN_02074, GFH07292	Hypothetical protein	0.01	OrthoFinder
lcl\|BLLF01000086.1_cds_GFH07293.1_1770	HaLaN_02075, GFH07293	PAS domain [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01000092.1_cds_GFH07404.1_1881	HaLaN_02198, GFH07404	PAS fold [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000429.1_cds_GFH11722.1_6199	HaLaN_07268, GFH11722	Hypothetical protein	0.01	OrthoFinder
lcl\|BLLF01000958.1_cds_GFH16182.1_10659	HaLaN_12556, GFH16182	PAS domain-containing protein	0.01	OrthoFinder
lcl\|BLLF01001945.1_cds_GFH21989.1_16466	HaLaN_19386, GFH21989	Hypothetical protein	0.02	OrthoFinder
lcl\|BLLF01002366.1_cds_GFH23804.1_18281	HaLaN_21483, GFH23804	Tiny macrocysts protein B	0.03	OrthoFinder
lcl\|BLLF01006378.1_cds_GFH32196.1_26673	HaLaN_31377, GFH32196	PAS domain-containing protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Enrichment
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009117	nucleotide metabolic process	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013767	PAS_fold	175	278
IPR000014	PAS	303	380

External Links

No external refs found!