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  5. Vocar.0001s0902.1

Vocar.0001s0902.1 (32885122)


Aliases : 32885122

Description : Peptidase family C50 [Interproscan].


Gene families : OG_01_0002035 (OrthoFinder) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0902.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cre01.g029200 30788620, ESP1 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder
Cz06g17230.t1 No alias Peptidase family C50 [Interproscan]. 0.04 OrthoFinder
Dusal.0026s00003.1 33185419 Peptidase family C50 [Interproscan]. 0.04 OrthoFinder
Sro289_g109220.1 Contig4471.g33606 Extra spindle pole bodies homolog 1 (Saccharomyces cerevisiae) 0.01 OrthoFinder
TP01G00290.1 No alias Peptidase family C50 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89918 89918 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01003173.1_cds_GFH26587.1_21064 HaLaN_24761, GFH26587 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496205.1_2203 KAA8496205 Separin 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!