Vocar.0001s0385.1 (32884246)

Aliases : 32884246

Description : Sister chromatid cohesion protein Dcc1 [Interproscan].

Gene families : OG_01_0003551 (OrthoFinder) Phylogenetic Tree(s): OG0003551_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0001s0385.1
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
EOD15621	No alias	Sister chromatid cohesion protein Dcc1 [Interproscan].	0.02	OrthoFinder
XM_002505746.1	MICPUN_63705, 63705	Sister chromatid cohesion protein Dcc1 [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000420.1_cds_GFH11635.1_6112	HaLaN_07167, GFH11635	Sister chromatid cohesion protein Dcc1 [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01003481.1_cds_GFH27452.1_21929	HaLaN_25773, GFH27452	DNA mismatch repair protein MSH5	0.03	OrthoFinder
lcl\|LHPG02000011.1_cds_PRW45519.1_1429	PRW45519	Sister chromatid cohesion DCC1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	None	Extended
BP	GO:0007064	mitotic sister chromatid cohesion	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
CC	GO:0031390	Ctf18 RFC-like complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003729	mRNA binding	IEP	Enrichment
CC	GO:0005685	U1 snRNP	IEP	Enrichment
BP	GO:0006376	mRNA splice site selection	IEP	Enrichment
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Enrichment
BP	GO:0022406	membrane docking	IEP	Enrichment
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Enrichment
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Enrichment
BP	GO:0048278	vesicle docking	IEP	Enrichment
BP	GO:0051640	organelle localization	IEP	Enrichment
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Enrichment
CC	GO:0097525	spliceosomal snRNP complex	IEP	Enrichment
CC	GO:0120114	Sm-like protein family complex	IEP	Enrichment
BP	GO:0140029	exocytic process	IEP	Enrichment
BP	GO:0140056	organelle localization by membrane tethering	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019128	Dcc1	26	400

External Links

No external refs found!