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  5. Vocar.0001s0099.1

Vocar.0001s0099.1 (32885796)


Aliases : 32885796

Description : Trypsin-like peptidase domain; Protease Do-like, PDZ domain [Interproscan].


Gene families : OG_01_0000337 (OrthoFinder) Phylogenetic Tree(s): OG0000337_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0099.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Cre14.g617600 30776594, DEG9 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder
Cz08g11120.t1 No alias Trypsin-like peptidase domain; Protease Do-like, PDZ... 0.02 OrthoFinder
EOD15281 No alias Protease Do-like, PDZ domain; Trypsin-like peptidase... 0.02 OrthoFinder
EOD21943 No alias Protease Do-like, PDZ domain; Trypsin-like peptidase... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 431 576
No external refs found!