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  5. Vocar.0001s0012.1

Vocar.0001s0012.1 (32884696)


Aliases : 32884696

Description : eRF1 domain 2; eRF1 domain 1/Pelota-like; eRF1 domain 3 [Interproscan].


Gene families : OG_01_0002303 (OrthoFinder) Phylogenetic Tree(s): OG0002303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0012.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
EOD34396 No alias eRF1 domain 1/Pelota-like; eRF1 domain 3; eRF1 domain 2... 0.02 OrthoFinder
Transcript_contig_55272 55272 eRF1 domain 2; eRF1 domain 3; eRF1 domain 1/Pelota-like... 0.01 OrthoFinder
XM_003057329.1 MicpuC2_32444, 32444 eRF1 domain 2; eRF1 domain 3; eRF1 domain 1/Pelota-like... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR005142 eRF1_3 278 415
IPR005140 eRF1_1_Pelota 16 137
IPR005141 eRF1_2 143 274
No external refs found!