TPCG02710.1

Description : Ribosomal protein L13 [Interproscan].

Gene families : OG_01_0000958 (OrthoFinder) Phylogenetic Tree(s): OG0000958_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TPCG02710.1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g264350	30779581, PRPL13	Protein biosynthesis.organelle translation...	0.05	OrthoFinder
Cre09.g405200	30781496, MRPL13	Protein biosynthesis.organelle translation...	0.05	OrthoFinder
Cz11g15150.t1	No alias	Ribosomal protein L13 [Interproscan].	0.03	OrthoFinder
OT_03G01410.1	No alias	Ribosomal protein L13 [Interproscan].	0.03	OrthoFinder
OT_06G01030.1	No alias	Ribosomal protein L13 [Interproscan].	0.03	OrthoFinder
Sro874_g214140.1	Contig589.g7365	Protein L13	0.03	OrthoFinder
Vocar.0002s0545.1	32890832	Ribosomal protein L13 [Interproscan].	0.05	OrthoFinder
Vocar.0062s0012.1	32892907	Ribosomal protein L13 [Interproscan].	0.02	OrthoFinder
XM_002501391.1	MICPUN_97280, 97280	Ribosomal protein L13 [Interproscan].	0.03	OrthoFinder
XM_003062638.1	MicpuC2_7563, 7563	Ribosomal protein L13 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005822	Ribosomal_L13	15	133

External Links

No external refs found!

TPCG02710.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation