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  5. TPCG02330.1

TPCG02330.1


Description : Ribosomal protein L3 [Interproscan].


Gene families : OG_01_0000938 (OrthoFinder) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG02330.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cre01.g022250 30789331, MRPL3 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cre48.g761197 30778371 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cz04g03220.t1 No alias Ribosomal protein L3 [Interproscan]. 0.02 OrthoFinder
Cz04g11050.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz04g11060.t1 No alias Ribosomal protein L3 [Interproscan]. 0.03 OrthoFinder
Dusal.0638s00007.1 33201545 Ribosomal protein L3 [Interproscan]. 0.01 OrthoFinder
OT_02G04320.1 No alias Ribosomal protein L3 [Interproscan]. 0.03 OrthoFinder
Sro51_chlor_g029470.1 Rpl3 Rpl3 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494995.1_3525 KAA8494995 50S ribosomal protein L3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009767 photosynthetic electron transport chain IEP Enrichment
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015708 silicic acid import across plasma membrane IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:0098657 import into cell IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098661 inorganic anion transmembrane transport IEP Enrichment
BP GO:0098739 import across plasma membrane IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 87 172
No external refs found!