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  5. TPCG00780.1

TPCG00780.1


Description : Ribosomal protein S18 [Interproscan].


Gene families : OG_01_0004123 (OrthoFinder) Phylogenetic Tree(s): OG0004123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG00780.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre09.g388282 30780462, MRPS18 No description available 0.04 OrthoFinder
Cz04g14230.t1 No alias Ribosomal protein S18 [Interproscan]. 0.01 OrthoFinder
CzCPg01080.t1 No alias Ribosomal protein S18 [Interproscan]. 0.04 OrthoFinder
Sro51_chlor_g030190.1 Rps18 Rps18 0.07 OrthoFinder
XM_003062800.1 MicpuC2_21905, 21905 Ribosomal protein S18 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57722.1_8596 PRW57722 30S ribosomal S18 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 14 64
No external refs found!