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  5. TPCG00670.1

TPCG00670.1


Description : Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal [Interproscan].


Gene families : OG_01_0001071 (OrthoFinder) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG00670.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre10.g423650 30790265, PRPL11 Protein biosynthesis.organelle translation... 0.07 OrthoFinder
Cz11g03060.t1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.04 OrthoFinder
EOD25013 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.02 OrthoFinder
EOD40511 No alias 50S ribosomal protein L11 [Ensembl]. 0.02 OrthoFinder
OT_14G01140.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.05 OrthoFinder
Sro51_chlor_g030320.1 Rpl11 Rpl11 0.15 OrthoFinder
Vocar.0030s0022.1 32894461 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.02 OrthoFinder
XM_002505743.1 MICPUN_92304, 92304 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.08 OrthoFinder
XM_003063782.1 MicpuC2_29915, 29915 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.02 OrthoFinder
lcl|BLLF01005196.1_cds_GFH30861.1_25338 HaLaN_29790, GFH30861 50S ribosomal protein L11 0.04 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33322.1_3528 PRW33322 50S ribosomal L11 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 2 66
IPR020783 Ribosomal_L11_C 71 139
No external refs found!