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  5. TPCG00110.1

TPCG00110.1


Description : Ribosomal protein L19 [Interproscan].


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPCG00110.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322500 30774415, MRPL19 No description available 0.02 OrthoFinder
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.12 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.06 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
OT_20G00580.1 No alias Ribosomal protein L19 [Interproscan]. 0.06 OrthoFinder
Sro79_g042660.1 Contig1826.g16073 Protein L19 0.02 OrthoFinder
Transcript_contig_86755 86755 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
Vocar.0031s0006.1 32890157 Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.1 OrthoFinder
XM_003063550.1 MicpuC2_9123, 9123 Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005622 intracellular anatomical structure IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009579 thylakoid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031360 intrinsic component of thylakoid membrane IEP Enrichment
CC GO:0031361 integral component of thylakoid membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 9 118
No external refs found!