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Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP23G01270.1 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD05780 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD06468 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD08607 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD09836 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD15375 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD19744 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD20807 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| EOD23225 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| EOD25905 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
| PTI_01G10030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_05G00320.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_14G03460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1207_g252450.1 | Contig242.g2948 | B binding protein L1818, chloroplastic | 0.03 | OrthoFinder | |
| Sro132_g062570.1 | Contig2745.g22100 | Chloroplastic | 0.04 | OrthoFinder | |
| Sro1347_g264950.1 | Contig4640.g34581 | B binding protein 6, chloroplastic | 0.03 | OrthoFinder | |
| Sro1430_g271970.1 | Contig4579.g34184 | B binding protein L1818, chloroplastic | 0.05 | OrthoFinder | |
| Sro1506_g278310.1 | Contig3888.g29862 | Chloroplastic | 0.04 | OrthoFinder | |
| Sro2423_g327210.1 | Contig3569.g27581 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro412_g137900.1 | Contig2922.g23262 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro60_g034620.1 | Contig797.g8939 | Chloroplastic | 0.04 | OrthoFinder | |
| Sro652_g181650.1 | Contig2024.g17318 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro698_g189300.1 | Contig480.g6500 | Chlorophyll a | 0.04 | OrthoFinder | |
| Sro698_g189330.1 | Contig480.g6503 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro74_g040880.1 | Contig4700.g34950 | I chlorophyll a/b-binding protein | 0.02 | OrthoFinder | |
| Sro829_g208070.1 | Contig1016.g10166 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro844_g209920.1 | Contig403.g5457 | Chloroplastic | 0.07 | OrthoFinder | |
| XM_002506509.1 | MICPUN_105009, 105009 | Chlorophyll a/b-binding protein (LI818R) | 0.04 | OrthoFinder | |
| lcl|BLLF01001602.1_cds_GFH20248.1_14725 | HaLaN_17338, GFH20248 | Chlorophyll a-b binding protein, chloroplastic | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
| MF | GO:0004177 | aminopeptidase activity | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
| BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Enrichment |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 65 | 222 |
| No external refs found! |