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  5. TP22G01370.1

TP22G01370.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP22G01370.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Sro226_g092060.1 Contig565.g7178 Helicase 0.03 OrthoFinder
Sro664_g183610.1 Contig3359.g26297 Helicase 0.03 OrthoFinder
Sro870_g213660.1 Contig1807.g15936 Helicase 0.02 OrthoFinder
Transcript_contig_54935 54935 Helicase-associated [Interproscan]. 0.01 OrthoFinder
Transcript_contig_880 880 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 309 371
No external refs found!