1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP20G02170.1

TP20G02170.1


Description : Ankyrin repeat-containing domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0006058 (OrthoFinder) Phylogenetic Tree(s): OG0006058_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP20G02170.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Sro2249_g320770.1 Contig1963.g16822 Ferrichrome siderophore peptide synthetase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 965 1089
IPR000873 AMP-dep_Synth/Lig 330 629
No external refs found!