Description : Aminoacyl-tRNA synthetase, class Ia; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding; Valyl-tRNA synthetase, tRNA-binding arm [Interproscan].
Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: TP20G01590.1 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000402.37 | tig00000402_g214.t1 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder | |
Cre07.g350500 | 30774357 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder | |
Cre12.g537100 | 30793066 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder | |
EOD05767 | No alias | Putative valyl-tRNA synthetase [Ensembl]. | 0.01 | OrthoFinder | |
EOD28592 | No alias | Putative valyl-tRNA synthetase [Ensembl]. | 0.01 | OrthoFinder | |
OT_03G02900.1 | No alias | Aminoacyl-tRNA synthetase, class Ia;... | 0.02 | OrthoFinder | |
OT_08G03790.1 | No alias | Aminoacyl-tRNA synthetase, class Ia;... | 0.04 | OrthoFinder | |
Sro427_g140590.1 | Contig2653.g21430 | Valine--tRNA ligase | 0.06 | OrthoFinder | |
Transcript_contig_89410 | 89410 | Aminoacyl-tRNA synthetase, class Ia; Glutathione... | 0.01 | OrthoFinder | |
Vocar.0023s0186.1 | 32883240 | Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... | 0.03 | OrthoFinder | |
XM_002508255.1 | MICPUN_84188, 84188 | Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... | 0.02 | OrthoFinder | |
XM_003058944.1 | MicpuC2_47388, 47388 | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... | 0.02 | OrthoFinder | |
lcl|BLLF01000476.1_cds_GFH12175.1_6652 | HaLaN_07812, GFH12175 | Aminoacyl-tRNA synthetase, class Ia [Interproscan]. | 0.02 | OrthoFinder | |
lcl|LHPG02000018.1_cds_PRW33017.1_3695 | PRW33017 | Valyl-tRNA synthetase | 0.02 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495921.1_1919 | KAA8495921 | Valine--tRNA ligase, chloroplastic/mitochondrial 2 | 0.03 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494573.1_3103 | KAA8494573 | Valine--tRNA ligase | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | Interproscan |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
MF | GO:0004832 | valine-tRNA ligase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | Interproscan |
BP | GO:0006438 | valyl-tRNA aminoacylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005886 | plasma membrane | IEP | Enrichment |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016744 | transketolase or transaldolase activity | IEP | Enrichment |
MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
MF | GO:0020037 | heme binding | IEP | Enrichment |
MF | GO:0030955 | potassium ion binding | IEP | Enrichment |
MF | GO:0031420 | alkali metal ion binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
No external refs found! |