TP20G01590.1


Description : Aminoacyl-tRNA synthetase, class Ia; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding; Valyl-tRNA synthetase, tRNA-binding arm [Interproscan].


Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP20G01590.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.37 tig00000402_g214.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cre07.g350500 30774357 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cre12.g537100 30793066 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
EOD05767 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
EOD28592 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
OT_03G02900.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
OT_08G03790.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.04 OrthoFinder
Sro427_g140590.1 Contig2653.g21430 Valine--tRNA ligase 0.06 OrthoFinder
Transcript_contig_89410 89410 Aminoacyl-tRNA synthetase, class Ia; Glutathione... 0.01 OrthoFinder
Vocar.0023s0186.1 32883240 Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... 0.03 OrthoFinder
XM_002508255.1 MICPUN_84188, 84188 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.02 OrthoFinder
XM_003058944.1 MicpuC2_47388, 47388 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|BLLF01000476.1_cds_GFH12175.1_6652 HaLaN_07812, GFH12175 Aminoacyl-tRNA synthetase, class Ia [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33017.1_3695 PRW33017 Valyl-tRNA synthetase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495921.1_1919 KAA8495921 Valine--tRNA ligase, chloroplastic/mitochondrial 2 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494573.1_3103 KAA8494573 Valine--tRNA ligase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004832 valine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0006438 valyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 599 757
IPR019499 Val-tRNA_synth_tRNA-bd 825 887
IPR002300 aa-tRNA-synth_Ia 2 542
No external refs found!